PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID NNU_022277-RA
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Proteales; Nelumbonaceae; Nelumbo
Family bHLH
Protein Properties Length: 274aa    MW: 30419.7 Da    PI: 9.4706
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
NNU_022277-RAgenomeCASView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.80.000222262601554
                    HHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH  15 riNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    r+++ +  L+ ++P       k +s +++L +Av+Y+ksL
  NNU_022277-RA 226 RMKKMMKALKGIVPGG-----KQMSTVAVLDEAVRYLKSL 260
                    6778888888888876.....67***************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088810.112211260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.99E-6220265No hitNo description
SMARTSM003533.5E-5220266IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.75E-7223267IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.2E-5223267IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    Send to blast
MYIVVNLKRY RTVKKVGKIT MNVRIIACYQ LMQVCQMQSD QHIYPKKVVA PLAYQVSSGY  60
MYNAPVAPGL GSTLPPGAKQ TTSFHGFEFQ PSEVFPKNFI IFDQTDNRSR IMFHPTLANK  120
FNCPGFDICG VNTDENGVRN RDNGEFSTPL KEDTEDINVL LSLEEEEEED RDDVSTARTN  180
GSCGSSSPDS CSTYGSKTSK RRLSSSIQKS FSGSGSSCNS ESKRLRMKKM MKALKGIVPG  240
GKQMSTVAVL DEAVRYLKSL KVEVKKLGIG NFKN
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010241336.11e-177PREDICTED: transcription factor bHLH144-like
RefseqXP_010241337.11e-177PREDICTED: transcription factor bHLH144-like
TrEMBLA5AUF11e-103A5AUF1_VITVI; Putative uncharacterized protein
STRINGVIT_10s0003g02940.t013e-84(Vitis vinifera)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G29950.21e-13bHLH family protein